CDS

Accession Number TCMCG007C28847
gbkey CDS
Protein Id XP_009141987.2
Location complement(join(20271720..20272703,20273228..20273707))
Gene LOC103865880
GeneID 103865880
Organism Brassica rapa

Protein

Length 487aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009143739.2
Definition regulatory protein NPR5 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Acts redundantly with BOP2. BOP1 2 promote leaf and floral meristem fate and determinacy in a pathway targeting AP1 and AGL24. BOP1 2 act as transcriptional co- regulators through direct interaction with TGA factors, including PAN, a direct regulator of AP1. Controls lateral organ fate through positive regulation of adaxial-abaxial polarity genes ATHB-14 PHB, YAB1 FIL and YAB3, and through positive regulation of LOB domain-containing genes LOB, LBD6 AS2 and LBD36. Promotes and maintains a developmentally determinate state in leaf cells through the negative regulation of JAG, JGL and class I KNOX genes. Is also involved in nectary development, formation of normal abscission zones and suppression of bract formation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K14508        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0002218        [VIEW IN EMBL-EBI]
GO:0002252        [VIEW IN EMBL-EBI]
GO:0002253        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009682        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009838        [VIEW IN EMBL-EBI]
GO:0009864        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009943        [VIEW IN EMBL-EBI]
GO:0009944        [VIEW IN EMBL-EBI]
GO:0009954        [VIEW IN EMBL-EBI]
GO:0009955        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010022        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010073        [VIEW IN EMBL-EBI]
GO:0010227        [VIEW IN EMBL-EBI]
GO:0010254        [VIEW IN EMBL-EBI]
GO:0010432        [VIEW IN EMBL-EBI]
GO:0010433        [VIEW IN EMBL-EBI]
GO:0010434        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010582        [VIEW IN EMBL-EBI]
GO:0019005        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031625        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044389        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048439        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065001        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCAGCCTTGAGGAATCCCTGAGATCTATGTCGTTGGATTTTCTAAACCTTTTAATTAACGGTCAAGCTTTCTCCGACGTAACTTTCAGCGTAGAAGGTCGTCTAGTCCACGCCCACCGTTGCATCCTCGCCGCTCGGAGCCTCTTCTTCCGCAAATTCTTCTGTGGGACCGACCAACCACAGTCCTGCATAGACCCGACCCGACATGGGTCAGTACCCGCTAGCCCAACAAGAGGCTCCCAGGCCCCAGCTGGAGTCATACCAGTGAACTCAGTCGGTTACGAGGTGTTCTTGTTGCTGCTTCAGTTTCTTTATAGCGGACAAGTCTCCATCGTGCCGCAGAAACATGAGCCGAGACCGAACTGTGGCGAAAGAGGATGTTGGCACACGCATTGCTCAGCCGCCGTGGATCTTGCTCTCGACACTCTTGCCGCTTCTCGTTACTTCGGCGTCGAGCAGCTCGCCTTGCTCACTCAGAAACAACTAGCAAGCATGGTGGAGAAAGCCTCCATCGAAGATGTAATGAAAGTGTTAATAGCATCAAGGAAGCAAGACATGCAACAACTATGGTCGACTTGCTCTCACTTAGTCGCCAAGTCAGGTCTCCCACCGGAGATTCTTGCCAAACATCTCACCATAGATGTCGTCGCCAAGATTGAAGAGATTCGTCTCAAAACATCAATATCTCGACGTTCACTAATGCCACATAACCACCACCATGATCTCACCGTCGCTCAAGACCTAGAAGATCAAAAGATTAGAAGGATGAGACGTGCCTTGGATTCATCTGACGTTGAGCTAGTGAAGCTAATGGTTATGGGAGAAGGACTCAATCTTGATGAGTCTTTGGCCTTGCATTACGCTGTTGAAAGCTGTAGTAGAGAAGTTGTGAAGGCTTTGCTTGAACTTGGTGCAGCCGATGTGAACTACCCGGCAGGTCCCGCGGGGAAAACACCGTTACACATTGCTGCTGAAATGGTCTCTCCCGACATGGTGGCTGTTTTGTTGGACCACCATGCTGATCCTAATGTTCGGACCGTTGGTGGAATCACTCCTCTTGATATCCTTAGGACGTTGACTTCAGATTTCTTGTTCAAGGGGGCAGTTCCTGGATTGACTCACATTGAACCGAACAAGCTTAGGCTTTGCCTTGAGCTTGTTCAGTCCGCTGCAATGGTGATATCTCGAGAAGAAGGAAACAATAGCAACAATAATAATAATGATTACAACAACCCGAGTTACCCTCAGATGAATGAGGAGCACAACAGTGGAAGTAGTGGAGGAAGTAATAACAATTTGGATTCAAGGTTGGTGTATCTCAATCTTGGAGCGGGTACGGGTCAGATGGGTCAGGGTCGGGATCATGGAGACGACCAAAACAGTCAAAGGGAAGGTATGAGTCGGCATAATCATCATCATCATCATGACCCGTCTACAATGTATCATCAACATCACTTCTAG
Protein:  
MSSLEESLRSMSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDQPQSCIDPTRHGSVPASPTRGSQAPAGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCSAAVDLALDTLAASRYFGVEQLALLTQKQLASMVEKASIEDVMKVLIASRKQDMQQLWSTCSHLVAKSGLPPEILAKHLTIDVVAKIEEIRLKTSISRRSLMPHNHHHDLTVAQDLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESLALHYAVESCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVGGITPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAAMVISREEGNNSNNNNNDYNNPSYPQMNEEHNSGSSGGSNNNLDSRLVYLNLGAGTGQMGQGRDHGDDQNSQREGMSRHNHHHHHDPSTMYHQHHF